![flowjo 10 apply compensation matrix flowjo 10 apply compensation matrix](https://docs.flowjo.com/wp-content/uploads/sites/6/2013/03/Screenshot_4_16_13_2_40_PM-2.png)
Workaround: Export the compensation matrix as an MTX file, and re-apply it to the exported data after bringing it back into a workspace. Issue: A BD 25 color data file may not include the compensation matrix when exported from and brought back into FlowJoâ„¢.
![flowjo 10 apply compensation matrix flowjo 10 apply compensation matrix](https://expert.cheekyscientist.com/wp-content/uploads/2019/06/two-SSM-from-two-different-flow-cytometer-instruments.jpeg)